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Recent Posts
- Local installation of DeepTMHMM December 3, 2025
- A simple solution for continuous, real-time monitoring with the Seabird SUNAV2 over RS232 March 22, 2025
- New postdoctoral position in pathogen ecology September 25, 2024
- Seeking postdoc in phytoplankton ecology August 27, 2024
- Recent blog post by PhD student Beth Connors February 13, 2024
- New paper: Antarctic metagenomes reveal novel microbial diversity May 19, 2023
- New postdoctoral research opportunity! April 7, 2023
- Alignment and phylogenetic inference with hmmalign and RAxML-ng May 31, 2022
- New paper on using machine learning to predict biogeochemistry from microbial community structure February 12, 2022
- Lab manager position open! January 15, 2022
Category Archives: Research
Frost flowers in the news
Well, at least on another blog. Thanks to Dr. Kim Martini, a physical oceanographer at the University of Alaska at Fairbanks, for including linked photos from this blog in an article on frost flowers for Deep Sea News. Dr. Martini’s … Continue reading
Posted in Research
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An Arctic MOSAIC
Back in June I had the opportunity to attend two workshops hosted by NOAA in Boulder, CO. The first workshop focused on bio-chemical-physical processes that affect the Arctic marine boundary layer (the lowest layer of the atmosphere). The boundary layer … Continue reading
Posted in MOSAiC, Research
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Merging a phylogenetic tree with a heatmap in R
***UPDATE*** I was recently introduced to a great tool for working with phylogenetic trees that can do something similar to what I describe below (and a whole lot more). Check it out at http://itol.embl.de/. ****** It seemed like a simple … Continue reading
Posted in Research
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New blog purpose
This blog was originally intended to share the experiences of our group while we conducted field work in Antarctica during the Austral winter/spring of 2011. The further I get into analysis however, the more I find myself needing a place … Continue reading
Posted in Research
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Things are changing fast
The sun has finally risen to a high enough angle that we’re able to get visible light satellite imagery via commercial satellites operated by DigitalGlobe. And just in time! We got this image this morning of the Cape Royds area. … Continue reading
Posted in McMurdo 2011 field season, Research
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