Comments on: The future of phylogeny https://www.polarmicrobes.org/the-future-of-phylogeny/ Marine Microbial Ecology Sat, 17 Dec 2016 00:19:13 +0000 hourly 1 https://wordpress.org/?v=6.9 By: Jeff https://www.polarmicrobes.org/the-future-of-phylogeny/#comment-150 Wed, 24 Jul 2013 17:04:44 +0000 http://www.polarmicrobes.org/?p=865#comment-150 I received a great suggestion for simplifying this code, using the itertools module:

import itertools

aa=list(‘ACDEFGHIKLMNPQRSTVWY’)
nmer_length = 5
aa_nmer = list(itertools.repeat(aa,nmer_length))
nmers = list(itertools.product(*aa_nmer))

print nmers

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