Comments on: Tutorial: Nanopore Analysis Pipeline https://www.polarmicrobes.org/tutorial-nanopore-analysis-pipeline/ Marine Microbial Ecology Thu, 09 Apr 2020 06:30:13 +0000 hourly 1 https://wordpress.org/?v=6.9.4 By: Pankaj https://www.polarmicrobes.org/tutorial-nanopore-analysis-pipeline/#comment-435 Thu, 09 Apr 2020 06:30:13 +0000 http://www.polarmicrobes.org/?p=2443#comment-435 Hi,
I am working on 16S data from MinION please guide me the working pipeline for the same and any reference would be great.

]]> By: Jeff https://www.polarmicrobes.org/tutorial-nanopore-analysis-pipeline/#comment-399 Sat, 08 Dec 2018 15:13:44 +0000 http://www.polarmicrobes.org/?p=2443#comment-399 That looks great, will check it out. We did play around with Nanopolish but I don’t think we’ve tried racon yet…

]]> By: Eric https://www.polarmicrobes.org/tutorial-nanopore-analysis-pipeline/#comment-398 Sat, 08 Dec 2018 01:05:02 +0000 http://www.polarmicrobes.org/?p=2443#comment-398 Nice! If you’re just doing nanopore you probably also want to do some polishing of the assembly before calling orfs

https://github.com/nanoporetech/ont-assembly-polish

]]>